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InteractionEmbeddingConfig — Configuration parameters for the interaction embedding.
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SpringLayoutConfig — Configuration parameters for the spring-layout embedding.
qoolqit.embedding.algorithms
package
qoolqit.embedding.algorithms
Classes
Functions
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interaction_embedding — Matrix embedding into the interaction term of the Rydberg Analog Model.
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spring_layout_embedding — Force-directed embedding, wrapping nx.spring_layout.
dataclass
InteractionEmbeddingConfig
(method: str = 'Nelder-Mead', maxiter: int = 200000, tol: float = 1e-08)
Bases : EmbeddingConfig
Configuration parameters for the interaction embedding.
interaction_embedding (matrix: np.ndarray, method: str, maxiter: int, tol: float) → np.ndarray
Matrix embedding into the interaction term of the Rydberg Analog Model.
Uses scipy.minimize to find the optimal set of node coordinates such that the matrix of values 1/(r_ij)^6 approximate the off-diagonal terms of the input matrix.
Check scipy.minimize documentation for more information on each parameter.
Parameters
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matrix : np.ndarray — the matrix to embed.
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method : str — the method used by scipy.minimize.
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maxiter : int — maximum number of iterations.
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tol : float — tolerance for termination.
dataclass
SpringLayoutConfig
(k: float | None = None, iterations: int = 50, threshold: float = 0.0001, seed: int | None = None)
Bases : EmbeddingConfig
Configuration parameters for the spring-layout embedding.
spring_layout_embedding (graph: DataGraph, k: float | None, iterations: int, threshold: float, seed: int | None) → DataGraph
Force-directed embedding, wrapping nx.spring_layout.
Generates a graph with the same nodes and edges as the original graph, but with node coordinates set to be the positions given by nx.spring_layout.
Check the documentation for nx.spring_layout for more information on each parameter.
Parameters
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graph : DataGraph — the graph to embed.
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k : float | None — optimal distance between nodes.
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iterations : int — maximum number of iterations to take.
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threshold : float — threshold value for relative error in node position changes.
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sed — random seed.